Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905038.1_cds_XP_016455179.1_49130
CDS Infomation

[gene=LOC107779296] [db_xref=GeneID:107779296] [protein=synaptotagmin-4-like isoform X2] [protein_id=XP_016455179.1] [location=join(15346..15450,16674..16775,17402..17452,18994..19114,20054..20175,20285..20383,20784..20864,20952..21037,21680..21905,22028..22192,22682..23080)] [gbkey=CDS]
Sequence

ATGGGGTTGATTTCTGGGATACTGATGGGGATGATCTTGGGGATCGGTTTAATGGCAGCT
TGGAAACATATGATGAGGTACAGGAGTAACAAACGAGTTGCTAAGGCAGTAGATGTAAAA
CTAATGGGCTGCCTCAACAGGGATGATCTAAAGAAAGTGTGTGGTGATAACTTTCCTGAA
TGGATATCATTCCCGGTTTATGAGCAGGTCAAGTGGTTGAACAAACAATTGAGCAAATTG
TGGCCATTTATTGCCGAAGCAGGAGAGGCTATTATAAGAGAATCCGTTGAACCTCTTTTA
GAAGATTATCAACCTCCTGGAATTACTTCATTGAAGTTCAGCAAATTATCATTGGGAACT
GTGGCACCTAAAATAGAAGGTATTCGTGTTCAGAGCCTTAAAAAAGGTCAAATCACTATG
GATATTGACCTCCGATGGGGTGGTGATCCCAATATTGTTTTAGGTGTTGAAGCTGCAATG
GTTGCTTCTATACCCATTCAGTTGAAAAATCTTCAAGTATTCACTGTTATTCGTGTTATC
TTCCAACTAACTGAGGAAATTCCTTGCATCTCGGCTGTTGTTGTAGCATTACTTTCTGAG
CCAAAGCCTAGAATCGACTATGTTTTGAAGGCGGTCGGTGGAAGTTTAACTGCTTTTCCC
GGACTTTCGGATATGATTGATGACACTGTAAATACAATAGTGACAGATATGCTAGAATGG
CCCCACAGAATTGTTGTTCCAATTGGCGGCGTACCTGTGGATAATAGCGATTTGGAGCTT
AAGCCACAGGGGAAGCTCATAGTAACTGTAGTCAAGGCTAATGGCTTAAAGAATCACGAA
ATGATCGGAAAATCTGATCCATATGTGGTTGTATACATTCGTCCACTTTTCAAGGTTAAG
ACAAAAACCATTGACAACAACCTAAATCCCGTTTGGGATCAGACGTTTGAGTTAATTGCA
GAAGACAAGGAGACCCAATCCCTCATTGTGGAGGTCTTCGATAAAGACGTTGGGCAAGAC
CAGCGAATGGGTGTCGCTAAGTTGCCTCTGAATGAGCTAGTAGCTGAGACTGCCAAAGAA
ATTGAATTAAGGTTACTGCCAAAACTTGATATGCTCAAAGTCAAAGATAAGAAGGATAGG
GGAACTATCACAATAAAGGTGTTGTATCATGAATTCAACAAGGAAGAGCAGTTAGCTGCT
CTGGAGGCAGAGAAGGTGATCCTAGAAGAAAGGAAGAAACTGAAAGCAGAAGGTGTCATT
GGGAGCACAATGGATGCCCTTGATGGGGCTGCATCACTGGTTGGTTCAGGTGTTGGTTTG
GTGGGCACTGGTCTTGGGGCAGGCGTGGGGCTCGTCGGAACCGGGGTAGGTGCTGGTGTA
GGAATAGTTGGAAGTGGCTTTGGAGCTGTTGGCAGTGGCCTAAGCAAAGCTGGAAAATTT
ATGGGAAGGACATTCACAAGCAGTTCAAAGAAGAGTGGTTCCTCTACTCCAGTAAACTCT
GTTCAAGAAAATGGTGGTGCAAAGCCACTCAAAACTGTACTTGCAAATACTGATTAG

Peptide Sequence

PEP ID

XP_016455179.1
PEP Infomation

PREDICTED: synaptotagmin-4-like isoform X2 [Nicotiana tabacum]
Sequence

MGLISGILMGMILGIGLMAAWKHMMRYRSNKRVAKAVDVKLMGCLNRDDLKKVCGDNFPE
WISFPVYEQVKWLNKQLSKLWPFIAEAGEAIIRESVEPLLEDYQPPGITSLKFSKLSLGT
VAPKIEGIRVQSLKKGQITMDIDLRWGGDPNIVLGVEAAMVASIPIQLKNLQVFTVIRVI
FQLTEEIPCISAVVVALLSEPKPRIDYVLKAVGGSLTAFPGLSDMIDDTVNTIVTDMLEW
PHRIVVPIGGVPVDNSDLELKPQGKLIVTVVKANGLKNHEMIGKSDPYVVVYIRPLFKVK
TKTIDNNLNPVWDQTFELIAEDKETQSLIVEVFDKDVGQDQRMGVAKLPLNELVAETAKE
IELRLLPKLDMLKVKDKKDRGTITIKVLYHEFNKEEQLAALEAEKVILEERKKLKAEGVI
GSTMDALDGAASLVGSGVGLVGTGLGAGVGLVGTGVGAGVGIVGSGFGAVGSGLSKAGKF
MGRTFTSSSKKSGSSTPVNSVQENGGAKPLKTVLANTD

Transcript Sequence

Gene sequence data has not been registered.